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GitHub / openalea 62 Repositories

OpenAlea is an open source project aimed at the plant research community. It includes modules to analyse and model growth and functioning of plant architectures

openalea/phenotyping_data

Data from plant phenotyping platform primarly aimed at desmonstrating/testing opeanalea phenotyping packages

Language: Python - Size: 347 MB - Last synced at: about 6 hours ago - Pushed at: about 9 hours ago - Stars: 0 - Forks: 0

openalea/phenomenal

Phenomenal: An automatic open source library for 3D shoot architecture reconstruction and analysis for image-based plant phenotyping

Language: Python - Size: 827 MB - Last synced at: about 6 hours ago - Pushed at: about 9 hours ago - Stars: 38 - Forks: 16

openalea/github-action-conda-build

A Github workflow to build your software package and publish to an Anaconda repository.

Size: 42 KB - Last synced at: about 6 hours ago - Pushed at: about 10 hours ago - Stars: 3 - Forks: 1

openalea/grapheditor

A generic graph visualisation and interaction OpenAlea library

Language: Python - Size: 390 KB - Last synced at: about 6 hours ago - Pushed at: about 10 hours ago - Stars: 2 - Forks: 2

openalea/plantgl

An open-source graphic toolkit for the creation, simulation and analysis of 3D virtual plants.

Language: C++ - Size: 21.6 MB - Last synced at: about 6 hours ago - Pushed at: about 9 hours ago - Stars: 64 - Forks: 23

openalea/action-build-publish-anaconda

Size: 67.4 KB - Last synced at: about 6 hours ago - Pushed at: 3 days ago - Stars: 3 - Forks: 2

openalea/mtg

Multiscale Tree Graph datastructure and interfaces

Language: Python - Size: 3.08 MB - Last synced at: about 6 hours ago - Pushed at: 2 days ago - Stars: 13 - Forks: 17

openalea/lpy

An open source python version of the Lindenmayer Systems.

Language: C++ - Size: 18 MB - Last synced at: about 6 hours ago - Pushed at: over 1 year ago - Stars: 66 - Forks: 28

openalea/sconsx

SConsX is an extension package of the famous SCons build tool.

Language: Python - Size: 412 KB - Last synced at: about 6 hours ago - Pushed at: 5 days ago - Stars: 2 - Forks: 6

openalea/core

Core functionality of openalea

Language: Python - Size: 1.79 MB - Last synced at: about 6 hours ago - Pushed at: 3 days ago - Stars: 4 - Forks: 8

openalea/oawidgets

OpenAlea Widgets for Jupyter Kernel

Language: Python - Size: 51.9 MB - Last synced at: 2 days ago - Pushed at: 3 days ago - Stars: 4 - Forks: 4

openalea/openalea.rtfd.io

OpenAlea main documentation site

Language: Jupyter Notebook - Size: 73.2 MB - Last synced at: about 6 hours ago - Pushed at: 7 days ago - Stars: 7 - Forks: 8

openalea/openalea

Official repository for OpenAlea. Other repos in the openalea organization contain things like the website, documentation, projects, etc.

Language: Python - Size: 40.2 MB - Last synced at: about 6 hours ago - Pushed at: about 6 years ago - Stars: 51 - Forks: 17

openalea/rhizodep

Rhizodep is a FSP model designed to simulate rhizodeposition processes

Language: Python - Size: 104 MB - Last synced at: 5 days ago - Pushed at: 27 days ago - Stars: 4 - Forks: 2

openalea/.github

test organisation wide issue templates

Size: 1.95 KB - Last synced at: 2 days ago - Pushed at: 10 days ago - Stars: 0 - Forks: 0

openalea/caribu

Eco-physiological model of light interception by plants

Language: C - Size: 6.14 MB - Last synced at: 2 days ago - Pushed at: 17 days ago - Stars: 7 - Forks: 11

openalea/adel

Characterization of 3D plant development for graminae crops

Language: Python - Size: 36.5 MB - Last synced at: 2 days ago - Pushed at: 24 days ago - Stars: 19 - Forks: 16

openalea/phenotrack3d

Phenotyping Maize over time

Language: Python - Size: 111 MB - Last synced at: about 6 hours ago - Pushed at: 28 days ago - Stars: 11 - Forks: 3

openalea/hydroroot

Simulation of hydraulic root architecture

Language: Jupyter Notebook - Size: 18 MB - Last synced at: about 6 hours ago - Pushed at: 14 days ago - Stars: 1 - Forks: 2

openalea/openalea-components

Openalea components

Language: Python - Size: 51.3 MB - Last synced at: about 6 hours ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 7

openalea/astk

Toolkit package for alinea

Language: Python - Size: 1.14 MB - Last synced at: 2 days ago - Pushed at: 16 days ago - Stars: 3 - Forks: 5

openalea/deepberry

deep-learning algorithm to detect and segment berries on grapewine images

Language: Python - Size: 70.5 MB - Last synced at: about 6 hours ago - Pushed at: 24 days ago - Stars: 2 - Forks: 0

openalea/hydroshoot

Hydroshoot model for 3D hydraulic architecture simulation

Language: Python - Size: 36.3 MB - Last synced at: about 6 hours ago - Pushed at: about 1 month ago - Stars: 18 - Forks: 11

openalea/strawberry

Strawberry architecture analysis and reconstruction

Language: Jupyter Notebook - Size: 41.8 MB - Last synced at: about 6 hours ago - Pushed at: 2 months ago - Stars: 14 - Forks: 7

openalea/visualea

Visual Programming Workflow environment for OpenAlea

Language: Python - Size: 1.87 MB - Last synced at: about 6 hours ago - Pushed at: 9 days ago - Stars: 4 - Forks: 5

openalea/weberpenn

Implementation of the tree model published by Weber & Penn

Language: Python - Size: 108 KB - Last synced at: about 6 hours ago - Pushed at: about 19 hours ago - Stars: 5 - Forks: 1

openalea/agroservices

AgroService is a Python package that provides access to IPM Web Services (at least) and a framework to easily implement Web Services wrappers. This package is intended to be close to the webservice. Therefore the requests will have the same API that each web service.

Language: Python - Size: 360 KB - Last synced at: about 6 hours ago - Pushed at: 28 days ago - Stars: 3 - Forks: 4

openalea/docker-stacks

Ready-to-run Docker images containing Openalea applications

Language: Dockerfile - Size: 86.9 KB - Last synced at: about 6 hours ago - Pushed at: 3 months ago - Stars: 4 - Forks: 2

openalea/WALTer

WALTer is a 3D FSPM Wheat model

Language: Python - Size: 3.01 MB - Last synced at: about 6 hours ago - Pushed at: about 2 months ago - Stars: 5 - Forks: 8

openalea/oalab

OpenAlea Laboratory

Language: Python - Size: 8.69 MB - Last synced at: about 6 hours ago - Pushed at: 5 months ago - Stars: 1 - Forks: 2

openalea/gafam

Growing AgroForestry with Apple in Mediterranean climate

Language: Jupyter Notebook - Size: 1.33 MB - Last synced at: about 6 hours ago - Pushed at: 5 months ago - Stars: 2 - Forks: 0

openalea/deploy

OpenAlea.Deploy support the installation of OpenAlea packages via the network and manage their dependencies.

Language: Python - Size: 630 KB - Last synced at: about 6 hours ago - Pushed at: 6 months ago - Stars: 2 - Forks: 7

openalea/StructureAnalysis

Plant structure analysis

Language: C++ - Size: 21.5 MB - Last synced at: about 6 hours ago - Pushed at: 11 days ago - Stars: 6 - Forks: 6

openalea/RSML

RSML : The language of root architecture

Language: Jupyter Notebook - Size: 7.54 MB - Last synced at: about 6 hours ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 3

openalea/PyCropML Fork of cyrillemidingoyi/PyCropML

CropML Python library

Language: Python - Size: 407 KB - Last synced at: about 6 hours ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 0

openalea/EpyMix

A Python Model to study Epidemic dilution and barrier factors in Mixture crops

Language: Jupyter Notebook - Size: 710 KB - Last synced at: about 6 hours ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

openalea/PyQGLViewer Fork of fredboudon/PyQGLViewer

PyQGLViewer is a set of Python bindings for the libQGLViewer C++ library which extends the Qt framework with widgets and tools that eases the creation of OpenGL 3D viewers.

Language: Python - Size: 287 KB - Last synced at: about 6 hours ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

openalea/vpltk

Language: Python - Size: 411 KB - Last synced at: about 6 hours ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 1

openalea/fractalysis

3D Fractal Analysis. Application to Light Interception.

Language: Python - Size: 473 KB - Last synced at: about 6 hours ago - Pushed at: about 7 years ago - Stars: 1 - Forks: 1

openalea/InfraPhenoGrid

A scientific workflow infrastructure for plant phenomics on the Grid

Language: Python - Size: 74.5 MB - Last synced at: about 6 hours ago - Pushed at: over 9 years ago - Stars: 2 - Forks: 3

openalea/braceroot

Language: Jupyter Notebook - Size: 3.71 MB - Last synced at: about 6 hours ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0

openalea/eartrack

An imaging library to detect and track future position of ears on maize plants

Language: Jupyter Notebook - Size: 338 MB - Last synced at: about 6 hours ago - Pushed at: about 6 years ago - Stars: 9 - Forks: 4

openalea/travis-ci Fork of StatisKit/travis-ci

Tools for Using Conda in Travis CI

Language: Shell - Size: 255 KB - Last synced at: about 6 hours ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

openalea/sigflow

Architectural Model of flowering on fruit trees

Language: Python - Size: 619 KB - Last synced at: about 6 hours ago - Pushed at: almost 5 years ago - Stars: 2 - Forks: 4

openalea/appveyor-ci Fork of StatisKit/appveyor-ci

Tools for Using Conda in AppVeyor CI

Language: Batchfile - Size: 185 KB - Last synced at: about 6 hours ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 1

openalea/plantscan3d Fork of fredboudon/plantscan3d

An open-source GUI for reconstructing plant 3D architecture from laser scans.

Language: Python - Size: 16.2 MB - Last synced at: about 6 hours ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 1

openalea/openalea-recipes

Conda recipes for OpenAlea

Language: Shell - Size: 253 KB - Last synced at: about 6 hours ago - Pushed at: over 6 years ago - Stars: 2 - Forks: 6

openalea/xml_representation Fork of AgriculturalModelExchangeInitiative/Crop2ML

Repository for options to describe a model unit in a declarative way. Imperative representation will be specific for each modelling framework.

Language: Java - Size: 1.9 MB - Last synced at: 22 days ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

openalea/container

basic common datastructures

Language: Python - Size: 31.2 MB - Last synced at: about 6 hours ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

openalea/plantlab

OpenAleaLab extension "plant"

Language: Python - Size: 67.4 KB - Last synced at: about 6 hours ago - Pushed at: about 7 years ago - Stars: 1 - Forks: 3

openalea/misc

Miscealnous Administrative tools for OpenAlea developers

Language: Python - Size: 1.58 MB - Last synced at: about 6 hours ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 2

openalea/deploygui

OpenAlea graphical installer

Language: Python - Size: 142 KB - Last synced at: about 6 hours ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

openalea/oapkg

Language: Python - Size: 48.8 KB - Last synced at: about 6 hours ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 1

openalea/lignum

OpenAlea / Lignum interface

Language: Jupyter Notebook - Size: 769 KB - Last synced at: about 6 hours ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

openalea/provenance

Provenance related tools for openalea

Language: Python - Size: 26.4 KB - Last synced at: about 6 hours ago - Pushed at: over 8 years ago - Stars: 1 - Forks: 2

openalea/conda-deploy

Scripts for OpenAlea deployment using conda and/or docker

Language: Shell - Size: 1000 Bytes - Last synced at: about 6 hours ago - Pushed at: over 8 years ago - Stars: 0 - Forks: 0

openalea/wlformat

Workflow environment definitions

Language: Python - Size: 85 KB - Last synced at: about 6 hours ago - Pushed at: almost 9 years ago - Stars: 0 - Forks: 1

openalea/openalea-opencv

OpenAlea workflow for OpenCV

Language: Python - Size: 84 KB - Last synced at: about 6 hours ago - Pushed at: over 9 years ago - Stars: 0 - Forks: 0

openalea/PkgIt

PkgIt is a python packaging tool for Windows.

Language: Python - Size: 313 KB - Last synced at: about 6 hours ago - Pushed at: almost 10 years ago - Stars: 0 - Forks: 1

openalea/openalea-website

repository for sources of documentation

Language: Python - Size: 840 KB - Last synced at: about 1 month ago - Pushed at: over 10 years ago - Stars: 0 - Forks: 0

openalea/openalea.github.io

build pages of th documentation

Language: JavaScript - Size: 246 KB - Last synced at: about 6 hours ago - Pushed at: almost 11 years ago - Stars: 0 - Forks: 0

openalea/scanalea

Transition layer between PlantScan project and OpenAlea

Language: Python - Size: 1.5 MB - Last synced at: about 6 hours ago - Pushed at: about 11 years ago - Stars: 3 - Forks: 5