GitHub / openalea 62 Repositories
OpenAlea is an open source project aimed at the plant research community. It includes modules to analyse and model growth and functioning of plant architectures
openalea/phenotyping_data
Data from plant phenotyping platform primarly aimed at desmonstrating/testing opeanalea phenotyping packages
Language: Python - Size: 347 MB - Last synced at: about 6 hours ago - Pushed at: about 9 hours ago - Stars: 0 - Forks: 0

openalea/phenomenal
Phenomenal: An automatic open source library for 3D shoot architecture reconstruction and analysis for image-based plant phenotyping
Language: Python - Size: 827 MB - Last synced at: about 6 hours ago - Pushed at: about 9 hours ago - Stars: 38 - Forks: 16

openalea/github-action-conda-build
A Github workflow to build your software package and publish to an Anaconda repository.
Size: 42 KB - Last synced at: about 6 hours ago - Pushed at: about 10 hours ago - Stars: 3 - Forks: 1

openalea/grapheditor
A generic graph visualisation and interaction OpenAlea library
Language: Python - Size: 390 KB - Last synced at: about 6 hours ago - Pushed at: about 10 hours ago - Stars: 2 - Forks: 2

openalea/plantgl
An open-source graphic toolkit for the creation, simulation and analysis of 3D virtual plants.
Language: C++ - Size: 21.6 MB - Last synced at: about 6 hours ago - Pushed at: about 9 hours ago - Stars: 64 - Forks: 23

openalea/action-build-publish-anaconda
Size: 67.4 KB - Last synced at: about 6 hours ago - Pushed at: 3 days ago - Stars: 3 - Forks: 2

openalea/mtg
Multiscale Tree Graph datastructure and interfaces
Language: Python - Size: 3.08 MB - Last synced at: about 6 hours ago - Pushed at: 2 days ago - Stars: 13 - Forks: 17

openalea/lpy
An open source python version of the Lindenmayer Systems.
Language: C++ - Size: 18 MB - Last synced at: about 6 hours ago - Pushed at: over 1 year ago - Stars: 66 - Forks: 28

openalea/sconsx
SConsX is an extension package of the famous SCons build tool.
Language: Python - Size: 412 KB - Last synced at: about 6 hours ago - Pushed at: 5 days ago - Stars: 2 - Forks: 6

openalea/core
Core functionality of openalea
Language: Python - Size: 1.79 MB - Last synced at: about 6 hours ago - Pushed at: 3 days ago - Stars: 4 - Forks: 8

openalea/oawidgets
OpenAlea Widgets for Jupyter Kernel
Language: Python - Size: 51.9 MB - Last synced at: 2 days ago - Pushed at: 3 days ago - Stars: 4 - Forks: 4

openalea/openalea.rtfd.io
OpenAlea main documentation site
Language: Jupyter Notebook - Size: 73.2 MB - Last synced at: about 6 hours ago - Pushed at: 7 days ago - Stars: 7 - Forks: 8

openalea/openalea
Official repository for OpenAlea. Other repos in the openalea organization contain things like the website, documentation, projects, etc.
Language: Python - Size: 40.2 MB - Last synced at: about 6 hours ago - Pushed at: about 6 years ago - Stars: 51 - Forks: 17

openalea/rhizodep
Rhizodep is a FSP model designed to simulate rhizodeposition processes
Language: Python - Size: 104 MB - Last synced at: 5 days ago - Pushed at: 27 days ago - Stars: 4 - Forks: 2

openalea/.github
test organisation wide issue templates
Size: 1.95 KB - Last synced at: 2 days ago - Pushed at: 10 days ago - Stars: 0 - Forks: 0

openalea/caribu
Eco-physiological model of light interception by plants
Language: C - Size: 6.14 MB - Last synced at: 2 days ago - Pushed at: 17 days ago - Stars: 7 - Forks: 11

openalea/adel
Characterization of 3D plant development for graminae crops
Language: Python - Size: 36.5 MB - Last synced at: 2 days ago - Pushed at: 24 days ago - Stars: 19 - Forks: 16

openalea/phenotrack3d
Phenotyping Maize over time
Language: Python - Size: 111 MB - Last synced at: about 6 hours ago - Pushed at: 28 days ago - Stars: 11 - Forks: 3

openalea/hydroroot
Simulation of hydraulic root architecture
Language: Jupyter Notebook - Size: 18 MB - Last synced at: about 6 hours ago - Pushed at: 14 days ago - Stars: 1 - Forks: 2

openalea/openalea-components
Openalea components
Language: Python - Size: 51.3 MB - Last synced at: about 6 hours ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 7

openalea/astk
Toolkit package for alinea
Language: Python - Size: 1.14 MB - Last synced at: 2 days ago - Pushed at: 16 days ago - Stars: 3 - Forks: 5

openalea/deepberry
deep-learning algorithm to detect and segment berries on grapewine images
Language: Python - Size: 70.5 MB - Last synced at: about 6 hours ago - Pushed at: 24 days ago - Stars: 2 - Forks: 0

openalea/hydroshoot
Hydroshoot model for 3D hydraulic architecture simulation
Language: Python - Size: 36.3 MB - Last synced at: about 6 hours ago - Pushed at: about 1 month ago - Stars: 18 - Forks: 11

openalea/strawberry
Strawberry architecture analysis and reconstruction
Language: Jupyter Notebook - Size: 41.8 MB - Last synced at: about 6 hours ago - Pushed at: 2 months ago - Stars: 14 - Forks: 7

openalea/visualea
Visual Programming Workflow environment for OpenAlea
Language: Python - Size: 1.87 MB - Last synced at: about 6 hours ago - Pushed at: 9 days ago - Stars: 4 - Forks: 5

openalea/weberpenn
Implementation of the tree model published by Weber & Penn
Language: Python - Size: 108 KB - Last synced at: about 6 hours ago - Pushed at: about 19 hours ago - Stars: 5 - Forks: 1

openalea/agroservices
AgroService is a Python package that provides access to IPM Web Services (at least) and a framework to easily implement Web Services wrappers. This package is intended to be close to the webservice. Therefore the requests will have the same API that each web service.
Language: Python - Size: 360 KB - Last synced at: about 6 hours ago - Pushed at: 28 days ago - Stars: 3 - Forks: 4

openalea/docker-stacks
Ready-to-run Docker images containing Openalea applications
Language: Dockerfile - Size: 86.9 KB - Last synced at: about 6 hours ago - Pushed at: 3 months ago - Stars: 4 - Forks: 2

openalea/WALTer
WALTer is a 3D FSPM Wheat model
Language: Python - Size: 3.01 MB - Last synced at: about 6 hours ago - Pushed at: about 2 months ago - Stars: 5 - Forks: 8

openalea/oalab
OpenAlea Laboratory
Language: Python - Size: 8.69 MB - Last synced at: about 6 hours ago - Pushed at: 5 months ago - Stars: 1 - Forks: 2

openalea/gafam
Growing AgroForestry with Apple in Mediterranean climate
Language: Jupyter Notebook - Size: 1.33 MB - Last synced at: about 6 hours ago - Pushed at: 5 months ago - Stars: 2 - Forks: 0

openalea/deploy
OpenAlea.Deploy support the installation of OpenAlea packages via the network and manage their dependencies.
Language: Python - Size: 630 KB - Last synced at: about 6 hours ago - Pushed at: 6 months ago - Stars: 2 - Forks: 7

openalea/StructureAnalysis
Plant structure analysis
Language: C++ - Size: 21.5 MB - Last synced at: about 6 hours ago - Pushed at: 11 days ago - Stars: 6 - Forks: 6

openalea/RSML
RSML : The language of root architecture
Language: Jupyter Notebook - Size: 7.54 MB - Last synced at: about 6 hours ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 3

openalea/PyCropML Fork of cyrillemidingoyi/PyCropML
CropML Python library
Language: Python - Size: 407 KB - Last synced at: about 6 hours ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 0

openalea/EpyMix
A Python Model to study Epidemic dilution and barrier factors in Mixture crops
Language: Jupyter Notebook - Size: 710 KB - Last synced at: about 6 hours ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

openalea/PyQGLViewer Fork of fredboudon/PyQGLViewer
PyQGLViewer is a set of Python bindings for the libQGLViewer C++ library which extends the Qt framework with widgets and tools that eases the creation of OpenGL 3D viewers.
Language: Python - Size: 287 KB - Last synced at: about 6 hours ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

openalea/vpltk
Language: Python - Size: 411 KB - Last synced at: about 6 hours ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 1

openalea/fractalysis
3D Fractal Analysis. Application to Light Interception.
Language: Python - Size: 473 KB - Last synced at: about 6 hours ago - Pushed at: about 7 years ago - Stars: 1 - Forks: 1

openalea/InfraPhenoGrid
A scientific workflow infrastructure for plant phenomics on the Grid
Language: Python - Size: 74.5 MB - Last synced at: about 6 hours ago - Pushed at: over 9 years ago - Stars: 2 - Forks: 3

openalea/braceroot
Language: Jupyter Notebook - Size: 3.71 MB - Last synced at: about 6 hours ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0

openalea/eartrack
An imaging library to detect and track future position of ears on maize plants
Language: Jupyter Notebook - Size: 338 MB - Last synced at: about 6 hours ago - Pushed at: about 6 years ago - Stars: 9 - Forks: 4

openalea/travis-ci Fork of StatisKit/travis-ci
Tools for Using Conda in Travis CI
Language: Shell - Size: 255 KB - Last synced at: about 6 hours ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

openalea/sigflow
Architectural Model of flowering on fruit trees
Language: Python - Size: 619 KB - Last synced at: about 6 hours ago - Pushed at: almost 5 years ago - Stars: 2 - Forks: 4

openalea/appveyor-ci Fork of StatisKit/appveyor-ci
Tools for Using Conda in AppVeyor CI
Language: Batchfile - Size: 185 KB - Last synced at: about 6 hours ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 1

openalea/plantscan3d Fork of fredboudon/plantscan3d
An open-source GUI for reconstructing plant 3D architecture from laser scans.
Language: Python - Size: 16.2 MB - Last synced at: about 6 hours ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 1

openalea/openalea-recipes
Conda recipes for OpenAlea
Language: Shell - Size: 253 KB - Last synced at: about 6 hours ago - Pushed at: over 6 years ago - Stars: 2 - Forks: 6

openalea/xml_representation Fork of AgriculturalModelExchangeInitiative/Crop2ML
Repository for options to describe a model unit in a declarative way. Imperative representation will be specific for each modelling framework.
Language: Java - Size: 1.9 MB - Last synced at: 22 days ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

openalea/container
basic common datastructures
Language: Python - Size: 31.2 MB - Last synced at: about 6 hours ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

openalea/plantlab
OpenAleaLab extension "plant"
Language: Python - Size: 67.4 KB - Last synced at: about 6 hours ago - Pushed at: about 7 years ago - Stars: 1 - Forks: 3

openalea/misc
Miscealnous Administrative tools for OpenAlea developers
Language: Python - Size: 1.58 MB - Last synced at: about 6 hours ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 2

openalea/deploygui
OpenAlea graphical installer
Language: Python - Size: 142 KB - Last synced at: about 6 hours ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

openalea/oapkg
Language: Python - Size: 48.8 KB - Last synced at: about 6 hours ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 1

openalea/lignum
OpenAlea / Lignum interface
Language: Jupyter Notebook - Size: 769 KB - Last synced at: about 6 hours ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

openalea/provenance
Provenance related tools for openalea
Language: Python - Size: 26.4 KB - Last synced at: about 6 hours ago - Pushed at: over 8 years ago - Stars: 1 - Forks: 2

openalea/conda-deploy
Scripts for OpenAlea deployment using conda and/or docker
Language: Shell - Size: 1000 Bytes - Last synced at: about 6 hours ago - Pushed at: over 8 years ago - Stars: 0 - Forks: 0

openalea/wlformat
Workflow environment definitions
Language: Python - Size: 85 KB - Last synced at: about 6 hours ago - Pushed at: almost 9 years ago - Stars: 0 - Forks: 1

openalea/openalea-opencv
OpenAlea workflow for OpenCV
Language: Python - Size: 84 KB - Last synced at: about 6 hours ago - Pushed at: over 9 years ago - Stars: 0 - Forks: 0

openalea/PkgIt
PkgIt is a python packaging tool for Windows.
Language: Python - Size: 313 KB - Last synced at: about 6 hours ago - Pushed at: almost 10 years ago - Stars: 0 - Forks: 1

openalea/openalea-website
repository for sources of documentation
Language: Python - Size: 840 KB - Last synced at: about 1 month ago - Pushed at: over 10 years ago - Stars: 0 - Forks: 0

openalea/openalea.github.io
build pages of th documentation
Language: JavaScript - Size: 246 KB - Last synced at: about 6 hours ago - Pushed at: almost 11 years ago - Stars: 0 - Forks: 0

openalea/scanalea
Transition layer between PlantScan project and OpenAlea
Language: Python - Size: 1.5 MB - Last synced at: about 6 hours ago - Pushed at: about 11 years ago - Stars: 3 - Forks: 5
