gitlab.inria.fr / mosaic 23 Repositories
MOrphogenesis Simulation and Analysis In siliCo
mosaic/timagetk
_TimageTK_ (Tissue Image Toolkit) is a Python package dedicated to **image processing of multicellular architectures**, such as plants or animals. It is intended for biologists, modellers and computer scientists.
Last synced at: 7 months ago - Stars: 1 - Forks: 2
mosaic/mosaic-commons
https://mosaic.gitlabpages.inria.fr/mosaic-commons
Last synced at: 7 months ago - Stars: 1 - Forks: 0
mosaic/bvpy
Bvpy is a python library, based on FEniCS, Gmsh & Meshio, to easily implement and study numerically Boundary Value Problems and Initial Boundary Value Problems through the Finite Element Method.
Last synced at: 7 months ago - Stars: 0 - Forks: 0
mosaic/cellcomplex
Python library implementing data structures and algorithms for the representation and manipulation of cellular complexes.
Last synced at: 7 months ago - Stars: 0 - Forks: 0
mosaic/treex
Python library for manipulating trees and DAG reduction of trees
Last synced at: 7 months ago - Stars: 2 - Forks: 0
mosaic/publications/bauer_etal_simu_supp
Supplementary material of the manuscript "Spatiotemporally distinct responses to mechanical forces shape the developing seed of Arabidopsis".
Last synced at: 7 months ago - Stars: 0 - Forks: 0
mosaic/lpy_tools
A set of tools to improve L-py functionalities
Last synced at: 7 months ago - Stars: 0 - Forks: 0
mosaic/geomtree
A package for treating trees augmented with 3D geometry.
Last synced at: 7 months ago - Stars: 1 - Forks: 0
mosaic/tissue_paredes
Polarity Analysis through Robust Extraction and Density Estimation of Signals at cell-wall level
Last synced at: 7 months ago - Stars: 0 - Forks: 0
mosaic/publications/sam_layer_height
Last synced at: 7 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
mosaic/publications/seed_sup_mat
Supplementary materials for the paper Endosperm turgor pressure restricts seed growth, by Audrey Creff, Olivier Ali, Vincent Bayle, Gwyneth Ingram and Benoit Landrein
Last synced at: 7 months ago - Stars: 0 - Forks: 0
mosaic/draco_stem
Python library for the reconstruction of 3D meshes from segmented shoot apical meristem (SAM) tissue images : Dual Reconstruction by Adjacency Complex Optimization (DRACO) and SAM Tissue Enhanced Mesh (STEM)
Last synced at: 7 months ago - Stars: 0 - Forks: 0
mosaic/publications/cauliflower
Models used in the article Azpeitia et al., Science 373, 192–197 (2021)
Last synced at: 7 months ago - Stars: 0 - Forks: 0
mosaic/publications/lpy2pc
Code to generate point cloud from Lpy model
Last synced at: 7 months ago - Stars: 0 - Forks: 0
mosaic/publications/tissue2d
Package to compute growth, cell division, cell wall stiffening and mechanical equilibrium of plant tissue cross sections formalized as 2D cell complexes.
Last synced at: 7 months ago - Stars: 0 - Forks: 0
