Package Usage: cran
affyPLM
1 dependent repository
BiocVersion
1 dependent repository
flowClust
1 dependent repository
rnirs
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Rcpm
1 dependent repository
dendsort 0.3.4
Modular Leaf Ordering Methods for Dendrogram Nodes1 dependent repository - 7 versions - Latest release: about 4 years ago - 2 dependent packages - 1,141 downloads last month
hgu133aprobe
1 dependent repository
BSgenome.Hsapiens.UCSC.hg18
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hgu95av2probe
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GlobalOptions 0.1.2
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hgu95av2cdf
1 dependent repository
drosophila2probe
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BSgenome.Dmelanogaster.UCSC.dm3
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affydata
1 dependent repository
GetoptLong 1.0.5
Parsing Command-Line Arguments and Simple Variable Interpolation1 dependent repository - 23 versions - Latest release: over 4 years ago - 6 dependent packages - 16,296 downloads last month
DO.db
1 dependent repository
pasillaBamSubset
1 dependent repository
TxDb.Athaliana.BioMart.plantsmart22
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TxDb.Dmelanogaster.UCSC.dm3.ensGene
1 dependent repository
BSgenome.Hsapiens.NCBI.GRCh38
1 dependent repository
genefilter
1 dependent repository
qvalue
1 dependent repository
influenceR 0.1.5
Software Tools to Quantify Structural Importance of Nodes in a Network1 dependent repository - 4 versions - Latest release: about 2 years ago - 2 dependent packages - 2,092 downloads last month
TxDb.Mmusculus.UCSC.mm10.knownGene
1 dependent repository
DEXSeq
1 dependent repository
DelayedMatrixStats
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lobstr 1.1.2
Visualize R Data Structures with Trees1 dependent repository - 5 versions - Latest release: almost 3 years ago - 14 dependent packages - 40,877 downloads last month
downloader 0.2.2
Download Files over HTTP and HTTPS1 dependent repository - 6 versions - Latest release: over 12 years ago - 33 dependent packages - 25,472 downloads last month
ggalt 0.4.0
Extra Coordinate Systems, 'Geoms', Statistical Transformations, Scales and Fonts for 'ggplot2'1 dependent repository - 2 versions - Latest release: over 8 years ago - 9 dependent packages - 5,890 downloads last month
DOSE
1 dependent repository
ggrastr 1.0.2
Rasterize Layers for 'ggplot2'1 dependent repository - 9 versions - Latest release: almost 2 years ago - 11 dependent packages - 11,765 downloads last month
tables 0.9.25
Formula-Driven Table Generation1 dependent repository - 20 versions - Latest release: about 1 year ago - 9 dependent packages - 15,961 downloads last month
BSgenome.Mmusculus.UCSC.mm10
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EnrichedHeatmap
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Gviz
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pasilla
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MatrixGenerics
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airway
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GenomeInfoDbData
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KEGGgraph
1 dependent repository
blob 1.2.4
A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS')1 dependent repository - 8 versions - Latest release: about 2 years ago - 22 dependent packages - 519,632 downloads last month
BSgenome.Scerevisiae.UCSC.sacCer2
1 dependent repository
HDF5Array
1 dependent repository
gridGraphics 0.5-1
Redraw Base Graphics Using 'grid' Graphics1 dependent repository - 11 versions - Latest release: over 4 years ago - 18 dependent packages - 35,373 downloads last month
sparseMatrixStats
1 dependent repository
hgu133plus2.db
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RBGL
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irace 3.4.1
Iterated Racing for Automatic Algorithm Configuration1 dependent repository - 20 versions - Latest release: about 5 years ago - 6 dependent packages - 1,533 downloads last month
SPIA
1 dependent repository
emoa 0.5-2
Evolutionary Multiobjective Optimization Algorithms1 dependent repository - 14 versions - Latest release: over 1 year ago - 18 dependent packages - 3,852 downloads last month
scater
1 dependent repository
GSEABase
1 dependent repository
rsvd 1.0.5
Randomized Singular Value Decomposition1 dependent repository - 8 versions - Latest release: about 4 years ago - 12 dependent packages - 14,134 downloads last month
sfsmisc 1.1-18
Utilities from 'Seminar fuer Statistik' ETH Zurich1 dependent repository - 70 versions - Latest release: about 1 year ago - 66 dependent packages - 23,301 downloads last month
bigmemory 4.6.4
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SingleCellExperiment
1 dependent repository
rngtools 1.5.2
Utility Functions for Working with Random Number Generators1 dependent repository - 12 versions - Latest release: over 3 years ago - 6 dependent packages - 24,508 downloads last month
zinbwave
1 dependent repository
pkgmaker 0.32.10
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blme 1.0-5
Bayesian Linear Mixed-Effects Models1 dependent repository - 13 versions - Latest release: over 4 years ago - 8 dependent packages - 6,513 downloads last month
eaf 2.4.1
Plots of the Empirical Attainment Function1 dependent repository - 17 versions - Latest release: about 2 years ago - 4 dependent packages - 1,439 downloads last month
uwot 0.2.2
The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction1 dependent repository - 14 versions - Latest release: about 1 year ago - 32 dependent packages - 37,921 downloads last month
RcppAnnoy 0.0.22
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hdf5r 1.3.10
Interface to the 'HDF5' Binary Data Format1 dependent repository - 16 versions - Latest release: about 1 year ago - 14 dependent packages - 16,689 downloads last month
SeuratObject 5.0.2
Data Structures for Single Cell Data1 dependent repository - 13 versions - Latest release: about 1 year ago - 18 dependent packages - 43,240 downloads last month
sctransform 0.4.1
Variance Stabilizing Transformations for Single Cell UMI Data1 dependent repository - 11 versions - Latest release: over 1 year ago - 5 dependent packages - 25,510 downloads last month
RcppProgress 0.4.2
An Interruptible Progress Bar with OpenMP Support for C++ in R Packages1 dependent repository - 7 versions - Latest release: over 5 years ago - 39 dependent packages - 43,503 downloads last month
pkgKitten 0.2.3
Create Simple Packages Which Do not Upset R Package Checks1 dependent repository - 11 versions - Latest release: about 2 years ago - 7 dependent packages - 4,695 downloads last month
gh 1.4.1
'GitHub' 'API'1 dependent repository - 8 versions - Latest release: about 1 year ago - 35 dependent packages - 264,836 downloads last month
Rtsne 0.17
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation1 dependent repository - 10 versions - Latest release: over 1 year ago - 55 dependent packages - 38,259 downloads last month
leiden 0.4.3
R Implementation of Leiden Clustering Algorithm1 dependent repository - 15 versions - Latest release: over 2 years ago - 4 dependent packages - 21,789 downloads last month
spatialreg 1.3-2
Spatial Regression Analysis1 dependent repository - 14 versions - Latest release: over 1 year ago - 24 dependent packages - 7,880 downloads last month
modeldata 1.3.0
Data Sets Useful for Modeling Examples1 dependent repository - 10 versions - Latest release: over 1 year ago - 41 dependent packages - 28,346 downloads last month
MAST
1 dependent repository
ellipsis 0.3.2
Tools for Working with ...1 dependent repository - 8 versions - Latest release: about 4 years ago - 68 dependent packages - 155,455 downloads last month
scRNAseq
1 dependent repository
margins 0.3.26
Marginal Effects for Model Objects1 dependent repository - 7 versions - Latest release: over 4 years ago - 14 dependent packages - 7,456 downloads last month
BiocFileCache
1 dependent repository
ps 1.7.6
List, Query, Manipulate System Processes1 dependent repository - 21 versions - Latest release: over 1 year ago - 18 dependent packages - 777,098 downloads last month
mixtools 2.0.0
Tools for Analyzing Finite Mixture Models1 dependent repository - 20 versions - Latest release: over 2 years ago - 39 dependent packages - 6,890 downloads last month
pillar 1.9.0
Coloured Formatting for Columns1 dependent repository - 29 versions - Latest release: about 2 years ago - 131 dependent packages - 1,408,923 downloads last month
generics 0.1.3
Common S3 Generics not Provided by Base R Methods Related to Model Fitting1 dependent repository - 6 versions - Latest release: almost 3 years ago - 154 dependent packages - 940,362 downloads last month
Rfast2 0.1.5
A Collection of Efficient and Extremely Fast R Functions II1 dependent repository - 15 versions - Latest release: almost 2 years ago - 10 dependent packages - 2,491 downloads last month
ggfun 0.1.4
Miscellaneous Functions for 'ggplot2'1 dependent repository - 15 versions - Latest release: over 1 year ago - 5 dependent packages - 50,112 downloads last month
glmnetUtils 1.1.9
Utilities for 'Glmnet'1 dependent repository - 12 versions - Latest release: over 1 year ago - 7 dependent packages - 2,802 downloads last month
fastmap 1.2.0
Fast Data Structures1 dependent repository - 5 versions - Latest release: about 1 year ago - 18 dependent packages - 1,014,300 downloads last month
thematic 0.1.5
Unified and Automatic 'Theming' of 'ggplot2', 'lattice', and 'base' R Graphics1 dependent repository - 7 versions - Latest release: over 1 year ago - 5 dependent packages - 4,087 downloads last month
modeltests 0.1.6
Testing Infrastructure for Broom Model Generics1 dependent repository - 7 versions - Latest release: about 1 year ago - 1 dependent package - 1,317 downloads last month
ff 4.0.12
Memory-Efficient Storage of Large Data on Disk and Fast Access Functions1 dependent repository - 28 versions - Latest release: over 1 year ago - 37 dependent packages - 11,973 downloads last month
sys 3.4.2
Powerful and Reliable Tools for Running System Commands in R1 dependent repository - 17 versions - Latest release: almost 2 years ago - 30 dependent packages - 764,932 downloads last month
fixest 0.12.0
Fast Fixed-Effects Estimations1 dependent repository - 30 versions - Latest release: about 1 year ago - 30 dependent packages - 15,363 downloads last month
monocle
1 dependent repository
bit 4.0.5
Classes and Methods for Fast Memory-Efficient Boolean Selections1 dependent repository - 24 versions - Latest release: over 2 years ago - 17 dependent packages - 671,986 downloads last month
ggplotify 0.1.2
Convert Plot to 'grob' or 'ggplot' Object1 dependent repository - 11 versions - Latest release: almost 2 years ago - 25 dependent packages - 32,673 downloads last month
ReactomePA
1 dependent repository
pls 2.8-3
Partial Least Squares and Principal Component Regression1 dependent repository - 27 versions - Latest release: over 1 year ago - 87 dependent packages - 27,538 downloads last month
rematch 2.0.0
Match Regular Expressions with a Nicer 'API'1 dependent repository - 2 versions - Latest release: over 1 year ago - 5 dependent packages - 665,086 downloads last month
themis 1.0.2
Extra Recipes Steps for Dealing with Unbalanced Data1 dependent repository - 11 versions - Latest release: almost 2 years ago - 2 dependent packages - 5,626 downloads last month
recipes 1.0.10
Preprocessing and Feature Engineering Steps for Modeling1 dependent repository - 31 versions - Latest release: about 1 year ago - 76 dependent packages - 133,736 downloads last month
scico 1.5.0
Colour Palettes Based on the Scientific Colour-Maps1 dependent repository - 7 versions - Latest release: almost 2 years ago - 5 dependent packages - 3,512 downloads last month