gitlab.in2p3.fr / micropicell / multiplexprocessor
Processing step between the microscope output and the analysis for multiplxed fluorescent data acquired by cycles
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licence: gpl-3.0+
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36
date de création: il y a presque 4 ans
date de mise à jour: il y a plus d'un an
dernière synchronisation: il y a plus d'un an
Sujets: Microscopy, image processing, multiplexing, workflow
cli/pom.xml
maven
- com.google.dagger:dagger 2.36
- fr.univ_nantes.codex_processor:core 0.1.0-SNAPSHOT
- info.picocli:picocli 4.6.1
- net.imagej:ij 1.53j
core/pom.xml
maven
- ch.epfl.Biomedical-Imaging-Group:DeconvolutionLab2 any
- ch.epfl.Biomedical-Imaging-Group:PSFGenerator any
- com.github.lejon:T-SNE-Java v2.6.3
- com.github.usnistgov:MIST master
- com.github.wendykierp:JTransforms 3.1
- com.google.code.gson:gson 2.8.7
- com.google.dagger:dagger 2.36
- commons-io:commons-io 2.11.0
- edu.emory.mathcs:JTransforms 2.4
- net.imagej:ij 1.53j
- net.lingala.zip4j:zip4j 2.9.0
- org.jcuda:jcuda-natives 0.9.0d
- org.jcuda:jcufft-natives 0.9.0d
- sc.fiji:Extended_Depth_Field 2.0.1
- sc.fiji:TurboReg_ 2.0.0
- sc.fiji:imageware 2.0.0
gui/pom.xml
maven
- com.github.stateless4j:stateless4j 2.6.0
- com.google.dagger:dagger 2.36
- fr.univ_nantes.codex_processor:core 0.1.0-SNAPSHOT
- net.sf.flowcyt:csv2fcs 0.0.0
- org.openjfx:javafx-controls 16
- org.openjfx:javafx-fxml 16
- org.openjfx:javafx-graphics 16
- tech.tablesaw:tablesaw-core LATEST
project_splitter/pom.xml
maven
- com.github.stateless4j:stateless4j 2.6.0
- com.google.dagger:dagger 2.36
- fr.univ_nantes.codex_processor:core 0.1.0-SNAPSHOT
- net.sf.flowcyt:csv2fcs 0.0.0
- org.openjfx:javafx-controls 16
- org.openjfx:javafx-fxml 16
- org.openjfx:javafx-graphics 16
- tech.tablesaw:tablesaw-core LATEST