gitlab.univ-nantes.fr / E15G239M / notebook
Notebook M2BB stage Institut du Thorax
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Dependencies parsed at:
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Created at: about 5 years ago
Updated at: 11 months ago
Pushed at: 11 months ago
Last synced at: about 1 year ago
- BiocGenerics >=0.31.1 depends
- R >= 3.3.0 depends
- methods * depends
- stats * depends
- stats4 * depends
- utils * depends
- BiocStyle * suggests
- DelayedArray * suggests
- GenomicRanges * suggests
- IRanges * suggests
- Matrix * suggests
- RUnit * suggests
- ShortRead * suggests
- SummarizedExperiment * suggests
- data.table * suggests
- graph * suggests
- BiocGenerics >= 0.15.3 depends
- GenomeInfoDb >= 1.15.2 depends
- GenomicRanges >= 1.37.4 depends
- R >= 2.8.0 depends
- Rsamtools >= 1.99.0 depends
- SummarizedExperiment >= 1.9.9 depends
- methods * depends
- AnnotationDbi >= 1.27.9 imports
- BSgenome >= 1.47.3 imports
- Biobase * imports
- Biostrings >= 2.47.6 imports
- DBI * imports
- GenomicFeatures >= 1.31.3 imports
- IRanges >= 2.13.13 imports
- S4Vectors >= 0.17.24 imports
- XVector >= 0.19.7 imports
- rtracklayer >= 1.39.7 imports
- utils * imports
- zlibbioc * imports
- AnnotationHub * suggests
- BSgenome.Hsapiens.UCSC.hg19 * suggests
- BiocStyle * suggests
- PolyPhen.Hsapiens.dbSNP131 * suggests
- RUnit * suggests
- SIFT.Hsapiens.dbSNP132 * suggests
- SIFT.Hsapiens.dbSNP137 * suggests
- SNPlocs.Hsapiens.dbSNP.20101109 * suggests
- TxDb.Hsapiens.UCSC.hg19.knownGene * suggests
- ggplot2 * suggests
- snpStats * suggests